Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1051446 chr12:75894114 C/T GLIPR1L2 chr12:75784850-75826468:+ 0.72 5.71 5.58E-7 Box Plot
ACC rs10562211 chr20:44411710 CTA/C WFDC3 chr20:44376583-44420571:- 0.95 7.03 4.44E-9 Box Plot
ACC rs10566969 chr5:96289036 GAGAC/G ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs10586101 chr2:114464756 CATT/C DDX11L2 chr2:114356613-114358838:- 0.76 5.77 4.37E-7 Box Plot
ACC rs1059307 chr6:86387888 G/T SNHG5 chr6:86370668-86388454:- 0.77 9.04 2.96E-12 Box Plot
ACC rs10604828 chr1:213048483 ATG/A LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs10617710 chr6:86283777 TATA/T SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs1062167 chr11:60161527 A/G MS4A14 chr11:60146003-60185229:+ 0.37 5.44 1.44E-6 Box Plot
ACC rs10637851 chr1:213058892 C/CTTTTTTT LQK1 chr1:213029947-213031480:- 0.84 9.74 2.53E-13 Box Plot
ACC rs10667294 chr20:44378370 T/TTCTC WFDC3 chr20:44376583-44420571:- 0.9 6.65 1.81E-8 Box Plot
ACC rs10681023 chr6:86378639 C/CTT SNHG5 chr6:86370668-86388454:- 0.7 6.29 6.69E-8 Box Plot
ACC rs10684065 chr5:56224485 T/TTGGC C5orf35 chr5:56205103-56213010:+ 0.91 5.37 1.84E-6 Box Plot
ACC rs10742688 chr11:43768254 A/G HSD17B12 chr11:43702108-43878167:+ 0.52 6.59 2.22E-8 Box Plot
ACC rs10742690 chr11:43867652 C/T HSD17B12 chr11:43702108-43878167:+ 0.54 6.19 9.47E-8 Box Plot
ACC rs10746439 chr1:213050209 G/A LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot